Throughout the biological and biomedical sciences there is a growing need for, prescriptive ‘minimum information’ (MI) checklists specifying the key information to include when reporting experimental results are beginning to find favor with experimentalists, analysts, publishers and funders alike. Such checklists aim to ensure that methods, data, analyses and results are described to a level sufficient to support the unambiguous interpretation, sophisticated search, reanalysis and experimental corroboration and reuse of data sets, facilitating the extraction of maximum value from data sets (...) them. However, such ‘minimum information’ MI checklists are usually developed independently by groups working within representatives of particular biologically- or technologically-delineated domains. Consequently, an overview of the full range of checklists can be difficult to establish without intensive searching, and even tracking thetheir individual evolution of single checklists may be a non-trivial exercise. Checklists are also inevitably partially redundant when measured one against another, and where they overlap is far from straightforward. Furthermore, conflicts in scope and arbitrary decisions on wording and sub-structuring make integration difficult. This presents inhibit their use in combination. Overall, these issues present significant difficulties for the users of checklists, especially those in areas such as systems biology, who routinely combine information from multiple biological domains and technology platforms. To address all of the above, we present MIBBI (Minimum Information for Biological and Biomedical Investigations); a web-based communal resource for such checklists, designed to act as a ‘one-stop shop’ for those exploring the range of extant checklist projects, and to foster collaborative, integrative development and ultimately promote gradual integration of checklists. (shrink)

Infants are endowed with a proclivity to acquire language, whether it is presented in the auditory or visual modality. Moreover, in the first months of life, listening to language supports fundamental cognitive capacities, including infants’ facility to form object categories. Recently, we have found that for English-acquiring infants as young as 4 months of age, this precocious interface between language and cognition is sufficiently broad to include not only their native spoken language, but also sign language. In the current study, (...) we take this work one step further, asking how “sign-naïve” infants—hearing infants with no prior exposure to sign language—deploy their attentional and social strategies in the context of episodes involving either spoken or sign language. We adopted a now-standard categorization task, presenting 4- to 6-month-old infants with a series of exemplars from a single category. Each exemplar was introduced by a woman who appeared on the screen together with the object. What varied across conditions was whether this woman introduced the exemplar by speaking or signing. We coded infants’ visual attentional strategies and their spontaneous vocalizations during this task. Infants’ division of attention and visual switches between the woman and exemplar varied as a function of language modality. In contrast, infants’ spontaneous vocalizations revealed similar patterns across languages. These results, which advance our understanding of how infants allocate attentional resources and engage with communicative partners across distinct modalities, have implications for specifying our theories of language acquisition. (shrink)

Many think that properties are powers. However, whilst some claim that properties are pure powers, others claim that properties are powerful qualities. In this paper, I argue that the canonical formulation of the powerful qualities view is no different from the pure powers view. Contrary to appearances, the two positions accept the same view of properties. Thus, the debate between them rests on an illusion. I draw out some consequences of this surprising result for issues over property individuation. Along the (...) way, I argue that all existing objections to the powerful qualities view fail. (shrink)

There is an overriding orthodoxy amongst philosophers that attention is a ‘unified phenomenon’, subject to explanation by one monistic theory. In this article, I examine whether this philosophical orthodoxy is reflected in the practice of psychology. I argue that the view of attention that best represents psychological work is a variety of conceptual pluralism. When it comes to the psychology of attention, monism should be rejected and pluralism should be embraced. _1_ The Monistic Consensus _2_ The Varieties of Pluralism _3_ (...) Three Concepts _3.1_ Blindsight _3.2_ Executive attention _3.3_ Alerting _4_ Pluralism _4.1_ Methodological conceptual pluralism _4.2_ Three monist interpretations _5_ Philosophical Monism? _6_ Conclusion. (shrink)

Recently, a new movement has arisen in the philosophy of perception: one that views perception as a natural kind. Strangely, this movement has neglected the extensive work in philosophy of science on natural kinds. The present paper remedies this. I start by isolating a widespread and influential assumption, which is that we can give necessary and sufficient conditions for perception. I show that this assumption is radically at odds with current philosophy of science work on natural kinds. I then develop (...) an alternative, new view of perception. This new view takes as its starting point the dominant position on kinds in the life sciences: the homeostatic property cluster account. I show that, if you accept this view, then all of the putative cases of unconscious perception are more plausibly seen as cases where it is indeterminate whether the mental episode in question is an instance of perception. (shrink)

A new research programme conceives of consciousness as a natural kind. One proposed virtue of this approach is that it can help resolve the methodological puzzle of consciousness, which involves distinguishing consciousness from cognitive access. The present article raises a novel problem for this approach. The problem is rooted in the fact that there may be episodes of conscious experience that have not been classified as such. I argue that conceiving of consciousness as a natural kind cannot distinguish consciousness from (...) cognitive access. (shrink)

Defenders of the phenomenal concept strategy have to explain how both physical and phenomenal concepts provide a substantive grasp on the nature of their referents, whilst referring to the very same experience. This is the ‘new challenge’ to physicalism. In this paper, I argue that if the physicalist adopts the powerful qualities ontology of properties then a new and powerful version of the phenomenal concept strategy can be developed, which answers the new challenge.

I offer a new response to the regress argument against pure powers ontologies. This involves rejecting an overlooked premiss, which is that a power’s manifestation is exhaustively accounted for by the powers involved in it. Rejection of this premiss not only answers the regress argument, but also brings with it wider metaphysical consequences, including a shift away from one-category ontologies.

One of the most important topics in current work on consciousness is what relationship it has to attention. Recently, one of the focuses of this debate has been on the phenomenon of identity crowding. Ned Block has claimed that identity crowding involves conscious perception of an object that we are unable to pay attention to. In this article, we draw upon a range of empirical findings to argue against Block's interpretation of the data. We also argue that current empirical evidence (...) strongly supports an interpretation of the data that emphasises cognitive inference over conscious perception. (shrink)

A central question for philosophical psychology is which mental faculties form natural kinds. There is hot debate over the kind status of faculties as diverse as consciousness, seeing, concepts, emotions, constancy and the senses. In this paper, I take emotions and concepts as my main focus, and argue that questions over the kind status of these faculties are complicated by the undeservedly overlooked fact that natural kinds are indeterminate in certain ways. I will show that indeterminacy issues have led to (...) an impasse in the debates over emotions and concepts. I first consider and reject one way of resolving this impasse. I then suggest a different method, which places more emphasis on a close analysis of predictive and explanatory practices in psychology. I argue that when we apply this method, a new position emerges: that it is indeterminate whether concepts or emotions are natural kinds. They are neither determinately natural kinds, nor determinately not natural kinds. Along the way, we will see that natural kinds have been put to two completely different theoretical uses, which are often been blurred together, and that they are ill-suited to fulfil one of them. (shrink)

Some have claimed that identity crowding is a case where we consciously see an object to which we are unable to pay attention. Opponents of this view offer alternative explanations, which emphasise the importance of prior knowledge, amongst other factors. We review new empirical evidence showing that prior knowledge has a profound effect on identity crowding. We argue that this is problematic for the “conscious seeing without attention” view, and supports an opposing view.

The combinatorial theory of modality has long been dogged by the supposed problem that it entails that S5 is not the correct logic for metaphysical modality. In this paper, I suggest a modification to combinatorialism, to eliminate this tension with S5. I argue that the resulting view is more in the spirit of combinatorialism than the original position.

This paper uses two case studies to explore an interest-relative view of taxonomy and how it complements kind pluralism in biology. First, I consider the ABC island bear, which can be correctly classified into more than one species. I argue that this classificatory pluralism can be explained by reference to the range of alternative explanatory interests in biology. In the second half of the paper, I pursue an interest-relative view of classification more generally. I then apply the resultant view to (...) a second case study: whether whales are fish. I argue that this question is not one about scientific vs folk usage, as has been assumed. I also develop a new view: that Fish should be rejected as a category, both from the point of view of biological science, and from the point of view of folk taxonomy. Along the way, I use the interest-relative view to shed light on the circumstances under which higher taxa should be accepted as legitimate categories for biological science. (shrink)

This paper examines attention as a scientific concept, and argues that it has a patchwork structure. On this view, the concept of attention takes on different meanings, depending on the scientific context. I argue that these different meanings vary systematically along four dimensions, as a result of the epistemic goals of the scientific programme in question and the constraints imposed by the scientific context. Based on this, I argue that attention is a general reasoning strategy concept: it provides general, non-specific (...) guidance that aids scientific work. As well as shedding light on attention as a scientific concept, this theory has two wider consequences. First, it demonstrates that the patchwork approach is a fruitful way to think about psychological concepts. Second, it provides novel resources to resist eliminativism about attention. (shrink)

Pluralist and eliminativist positions have proliferated within both science and philosophy of science in recent decades. This paper asks the question why this shift of thinking has occurred, and where it is leading us. We provide an explanation which, if correct, entails that we should expect pluralism and eliminativism to transform other debates currently unaffected, and for good reasons. We then consider the question under what circumstances eliminativism will be appropriate, arguing that it depends not only on the term in (...) question, but also on the context of discussion and details of the debate at hand. The resultant selective eliminativism is an appealing compromise for various ‘pluralists’ and ‘eliminativists’ who are currently locking horns. (shrink)

This paper develops and defends a compound powerful qualities view of properties. According to this view, properties are essentially composed of distinct powerful and qualitative elements. First, I outline an argument for the compound powerful qualities view, based on the claim that it has the explanatory power of other views, without incurring their costs. Second, I argue that the view has the resources to explain how properties are individuated, by claiming that properties are partially individuated by their qualitative elements, and (...) partially by their powerful elements. Third, I distinguish two versions of the view, one of which says that the qualitative and powerful are parts of properties, the other of which says that they are aspects of properties. I argue that the parthood view is the more parsimonious because it can avoid postulating a novel metaphysical relation. Fourth, I argue that the relation between the powerful and qualitative elements of a property is necessary, and lay out various viable options concerning what the relation might be, including grounding and primitivism. (shrink)

Some have argued that panpsychism offers the most simple view of reality. The most prominent advocate of this argument is Philip Goff. In this paper, I examine Goff’s position and argue that considerations of simplicity and parsimony do not support panpsychism. Quite the reverse: they give us good reason to reject it.

A layman's view of history.--Old age.--The education of Henry Adams.--Mont-Saint Michel and Chartres.--The Phi beta kappa ideal.--Pieces written during the war: The pathos of America. Sub specie æternitatis. The wisdom of the ages.

The powerful qualities view of properties is currently enjoying a surge in popularity. Recently, I have argued that the standard version of the view is no different from a rival view: the pure powers position. I have also argued that the canonical version of the powerful qualities view faces the same problem as the pure powers view: the dreaded regress objection. Joaquim Giannotti disagrees. First, Giannotti thinks that the standard version of the powerful qualities view can be differentiated from the (...) pure powers view. Second, Giannotti argues that the powerful qualities view is not susceptible to the regress objection. Third, he argues that there is another reasonable version of the powerful qualities view available, which makes use of the notion of ‘aspects’. In this note, I respond to Giannotti. I argue that all three of Giannotti’s arguments are unsuccessful. (shrink)

There have recently been a number of attempts to put forth a philosophical account of the nature of attention. Many such theories aim at giving necessary and sufficient conditions for something to be attention. In this paper I will argue that any such theory must meet two criteria. Then I shall examine four prominent accounts of attention in some detail, and argue that all of them face problems meeting one or the other of the criteria. I propose an alternative view, (...) which involves taking seriously a pluralistic approach to attention. If the position I advocate is correct, then much of the philosophical work currently carried out on attention is fundamentally misguided, as most of the prominent theories of attention currently available are based upon assumptions which should be rejected. (shrink)

This book is the result of my need and my attempt to meet it. viii HUMAN VALUES AND VERITIES Beyond my personal appreciation and estimate of these broad topics ...

David Chalmers’ ‘conceivability’ argument against physicalism is perhaps the most widely discussed and controversial argument in contemporary philosophy of mind. Recently, several thinkers have suggested a novel response to this argument, which employs the ‘powerful qualities’ ontology of properties. In this paper, I argue that this response fails because it presupposes an implausible account of the physical/phenomenal distinction. In the course of establishing this, I discuss the so-called ‘ultimate’ argument for the claim that dispositional properties form the subject matter of (...) physics. I argue that the ultimate argument can be interpreted in a strong or a weak way, and that the strong interpretation is implausible. I argue that this undermines the powerful qualities based response to the conceivability argument. I also argue for a general conclusion: that we should not define ‘the physical’ exclusively in terms of a distinction drawn from ontology. (shrink)

One of the most poorly understood features of consciousness is the relation between an experience and the subject of the experience. In this paper, I develop an ontology of consciousness on which experiences are events constituted by substances having properties at times. I use this to explain the relation between a subject and her experience.

Though physicalism remains the most popular position in the metaphysics of mind today, there is still considerable debate over how to retain a plausible account of mental concepts consistently with a physicalistic world view. Philip Goff (Australasian Journal of Philosophy 89(2), 191–209, 2011) has recently argued that physicalism cannot give a plausible account of our phenomenal concepts, and that as such, physicalism should be rejected. In this paper I hope to do three things, firstly I shall use some considerations from (...) ontology to rebut Goff’s argument and consider some objections and replies. Secondly, I shall outline a version of a posteriori physicalism about phenomenal consciousness which draws on this particular ontology. Thirdly, I shall give support to this version of physicalism by arguing that it marries well with prominent theories in cognitive science, and has important advantages over other versions of a posteriori physicalism. (shrink)

This paper is concerned with the ambiguities and confusions that arise when studies of the ‘surveillance state’ are contrasted with studies of the ‘service state’. Surveillance studies take a largely negative view of the information capture and handling of personal data by Government agencies. Studies that examine Government service providing take a largely positive view of such data capture as Government is seen to be attempting to enhance service provision to individual citizens. This paper examines these opposing perspectives through a (...) series of case studies and concludes that a new understanding and methodology should be brought forward so as to create a reconciliation of these two points of departure for research. The call is for an holistic appreciation of data capture activities by Government so that researchers and public policy makers alike can appreciate and reconcile these competing perspectives. (shrink)

Continuity and survival.--Continuities in history.--The chosen self.--Soul of Archilochus.--Placing the middle ages.

All rights reserved no part of this book may be reproduced in any form without permission in writing from the publisher, except by a reviewer who wishes to ...

The theme of the third annual Spring workshop of the HUPO-PSI was proteomics and beyond and its underlying goal was to reach beyond the boundaries of the proteomics community to interact with groups working on the similar issues of developing interchange standards and minimal reporting requirements. Significant developments in many of the HUPO-PSI XML interchange formats, minimal reporting requirements and accompanying controlled vocabularies were reported, with many of these now feeding into the broader efforts of the Functional Genomics Experiment data (...) model and Functional Genomics Ontology ontologies. (shrink)

Book Five Of Thought And Expression In The Sixteenth Century.